Protein Alignment bap and Lhx1

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_665887.3
• Gene: Lhx1 / 257634
• RGDID: 71074
• Length: 406
• Species: Rattus norvegicus
• Alignment Length: 369
• Identity: 83/369 - (22%)
• Similarity: 129/369 - (34%)
• Gaps: 82/369 - (22%)

  Fly    59 ERSISKSPPLCCRD----------LGLYKLTQPKEIQPSARQPSNYLQYYAAAM----------- 102
            |:..|:...|.|::          .|..:...|.::...||....:|..:...|
  Rat    40 EKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEEL 104

  Fly   103 ---DNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESP 164
               |.|....:....||||.|.......|..||..:...|.:..:.:|:. ||.....|......
  Rat   105 YIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAK-DSESANVSDKEGGS 168

  Fly   165 LSHDGSGLSRKKRS-RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRY 228
            ..:|...|..|:|. |......|:..|:..||.....:...|.::|:...|....:::||||||.
  Rat   169 NENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRS 233

  Fly   229 KTKR-KQIQQHEAALLGASK----RVPVQV-----------LVREDGSTTY----AHMAAPGAGH 273
            |.:| ||:     :.|||.:    |.|.::           |:.....:.|    :....||..:
  Rat   234 KERRMKQL-----SALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNY 293

  Fly   274 GLDPALINIYRHQLQLAYGGLPLPQMQ----MPF-----PYFYPQHKVPQPIP---PPTQSSSF- 325
            ...|.              |.|..|.|    :||     |...|...:..|:|   |.:::..|
  Rat   294 DFFPQ--------------GPPSSQAQTPVDLPFVPSSGPSGTPLGGLDHPLPGHHPSSEAQRFT 344

  Fly   326 -VTASSASSSPVPIP-IPGAVRPQRTPC--PSPNGQMMSVESGA 365
             :.|.....||.|.| :||.:.......  |||....:||..||
  Rat   345 DILAHPPGDSPSPEPSLPGPLHSMSAEVFGPSPPFSSLSVNGGA 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	15/53 (28%)
Lhx1	NP_665887.3	LIM1_Lhx1_Lhx5	4..55	CDD:188753	4/14 (29%)
		LIM2_Lhx1_Lhx5	63..118	CDD:188761	8/54 (15%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	128..189		13/61 (21%)
		Homeobox	183..237	CDD:395001	15/53 (28%)
		dnaA	<263..>382	CDD:237605	27/132 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	294..372		20/91 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910