Protein Alignment bap and Pax6

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_006234695.1
• Gene: Pax6 / 25509
• RGDID: 3258
• Length: 436
• Species: Rattus norvegicus
• Alignment Length: 413
• Identity: 90/413 - (21%)
• Similarity: 146/413 - (35%)
• Gaps: 105/413 - (25%)

  Fly    16 LSKSLTTPFSINDIL-TRSNPETRRMSSVD------SEPEPEKLKPSSDRERSISKSPPLCCRDL 73
            |:.|...|..|:.|| |.::.:.:.:.|.:      |:......:..|.|.|:|..|.|......
  Rat    32 LAHSGARPCDISRILQTHADAKVQVLDSENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPE 96

  Fly    74 GLYKLTQPKEIQPSA---RQPSNYLQYYAAAMDN-------NNHHHQATGTSNSSAADYMQRKLA 128
            .:.|:.|.|...||.   ......|.......||       |..............||.|..||.
  Rat    97 VVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLR 161

  Fly   129 ---------------YFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRK-KR 177
                           |.|:::........|...:...::...:||:..:|..:.....|.|| :|
  Rat   162 MLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRLQLKRKLQR 226

  Fly   178 SRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQ---IQQHE 239
            :|.:|:..|:..||:.|.:..|.....|..:|..:.|.|.::::||.|||.|.:|::   .|:.:
  Rat   227 NRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQ 291

  Fly   240 AALLGASKRVPVQVLVREDGSTT-YAHMAAP---------GAGHG-LDPALINIYRHQLQLAYGG 293
            |:      ..|..:.:....||: |..:..|         |:..| .|.||.|        .|..
  Rat   292 AS------NTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTN--------TYSA 342

  Fly   294 LPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFV-------------------------------- 326
            ||      |.|.|...:.:|...|.|:|:||:.
  Rat   343 LP------PMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMG 401

  Fly   327 ---TASSASSSP---VPIPIPGA 343
               |.|:...||   ||:.:||:
  Rat   402 TSGTTSTGLISPGVSVPVQVPGS 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	17/52 (33%)
Pax6	XP_006234695.1	PAX	4..142	CDD:128645	24/109 (22%)
		Homeobox	228..281	CDD:395001	17/52 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910