Protein Alignment bap and Msx2

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_037114.2
• Gene: Msx2 / 25483
• RGDID: 3116
• Length: 267
• Species: Rattus norvegicus
• Alignment Length: 328
• Identity: 82/328 - (25%)
• Similarity: 117/328 - (35%)
• Gaps: 122/328 - (37%)

  Fly    18 KSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLG--LYKLTQ 80
            |..:.|||:..::              |:.:|.|..|:         .|| .|...|  |..|..
  Rat    41 KVSSLPFSVEALM--------------SDKKPPKESPA---------VPP-DCASAGAVLRPLLL 81

  Fly    81 PKEIQPSARQPSNYLQ-YYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCT 144
            |......|..|...:: :..|::.:.|         :...|.::|....|
  Rat    82 PGHGVRDAHSPGPLVKPFETASVKSEN---------SEDGAPWIQEPGRY--------------- 122

  Fly   145 SNDSDCDSPPPLSSSPSESPL-SHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEM 208
                   ||||...||:...| .|     ...::.|..|:.:|:..|||:|.|::|||..||:|.
  Rat   123 -------SPPPRHMSPTTCTLRKH-----KTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEF 175

  Fly   209 AKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGH 273
            :.||.||||||||||||||.|.||.|..:.|...:.|...:|                    :|.
  Rat   176 SSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLP--------------------SGF 220

  Fly   274 GLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPI 338
            .|                                     |.||..|.|::|..:||.....|| :
  Rat   221 SL-------------------------------------PFPINSPLQAASIYSASYPFHRPV-L 247

  Fly   339 PIP 341
            |||
  Rat   248 PIP 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	31/52 (60%)
Msx2	NP_037114.2	Homeobox	145..199	CDD:395001	31/53 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910