DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and gbx2

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:253 Identity:65/253 - (25%)
Similarity:92/253 - (36%) Gaps:90/253 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PEKLKPSSDRERSISKSPPLCCRDL---------------GLYKLTQPKEIQPSARQPSNYLQYY 98
            |:...|::.....|...|...|..|               |.:..:..::.|.:||:..:  |..
Zfish    67 PQSALPTTHPHHPIPGLPSSFCSSLAQGMALTSTLMATLPGGFSSSPSQQHQDAARKLGS--QSI 129

  Fly    99 AAAMDNNN-----------------------HHHQATGTS-------NSSAADYMQRKLAYFGST 133
            .|..|.:.                       |..|:..||       :.|..|...||...|   
Zfish   130 HAMFDKSQDIRLDGEDGKTFATKDSTSIPSFHDSQSVHTSTVRGHSKDDSKEDDCHRKDESF--- 191

  Fly   134 LAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLS------------------HDGSG------LSR 174
                       |.|||.|     .||....|.:                  |.|:|      ..:
Zfish   192 -----------SMDSDLD-----YSSDDNGPGNAMCQKEDGDGSGGLDDGVHGGNGAGNTTSTGK 240

  Fly   175 KKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKR 232
            .:|.|.||:..|:.|||:.|..::|||..|||::|.:|:|:|.||||||||||.|.||
Zfish   241 NRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 29/52 (56%)
gbx2NP_694496.1 Homeobox 244..297 CDD:278475 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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