DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and Nkx2-1

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_011242403.1 Gene:Nkx2-1 / 21869 MGIID:108067 Length:423 Species:Mus musculus


Alignment Length:323 Identity:89/323 - (27%)
Similarity:119/323 - (36%) Gaps:112/323 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQ 80
            :|...|||||::|||:                      |..:..:.:..........|..|:   
Mouse    54 MSPKHTTPFSVSDILS----------------------PLEESYKKVGMEGGGLGAPLAAYR--- 93

  Fly    81 PKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTS 145
                |..|..|:..:|.:|.     .||...|...:.:||...|...:..|.         .|..
Mouse    94 ----QGQAAPPAAAMQQHAV-----GHHGAVTAAYHMTAAGVPQLSHSAVGG---------YCNG 140

  Fly   146 NDSDCDSPPPLSSS-------------------PSESPLSHDGSGLS------------------ 173
            |..:....||...:                   |:.|......||::                  
Mouse   141 NLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMA 205

  Fly   174 ------RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKR 232
                  |:|| |..||.|||:||||||.||:|||.|||..:|..:.||.|||||||||.|||.||
Mouse   206 PLPSAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR 269

  Fly   233 --------KQIQ----------------QHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGA 271
                    :|:|                |.:.|...:.:||.|.|||: ||....|...||||
Mouse   270 QAKDKAAQQQLQQDSGGGGGGGGGAGCPQQQQAQQQSPRRVAVPVLVK-DGKPCQAGAPAPGA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 35/52 (67%)
Nkx2-1XP_011242403.1 Homeobox 215..269 CDD:395001 36/54 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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