DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and ceh-30

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:203 Identity:60/203 - (29%)
Similarity:87/203 - (42%) Gaps:44/203 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SNDSDCD--------SPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLS 201
            |||.|..        |..|.:|||....:...|| ..:.:::|..|:..|:.|||..|.:|:|||
 Worm    58 SNDHDPSPQSIKSDFSTSPRASSPGGDRMGSPGS-CKKSRKARTIFTDKQLQELENTFEKQKYLS 121

  Fly   202 GPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQ----QHEAALLGASKRVPVQVLVREDGSTT 262
            ..:|.::|..:.||:||||.|:||||.|.||:...    ..|...|.|     ||.|:|   |:.
 Worm   122 VQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSGMDLLSEPGNLSA-----VQNLIR---SSP 178

  Fly   263 YAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVT 327
            |                   :.:.:.....|..||.|.:|.....|    |.....|:.||:..:
 Worm   179 Y-------------------WANYITALPMGTQLPMMGLPMSMIVP----PAHAFQPSSSSNSPS 220

  Fly   328 ASSASSSP 335
            ...:|.||
 Worm   221 THISSESP 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 25/52 (48%)
ceh-30NP_508524.2 Homeobox 99..151 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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