DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and Otx2

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001273410.1 Gene:Otx2 / 18424 MGIID:97451 Length:297 Species:Mus musculus


Alignment Length:244 Identity:59/244 - (24%)
Similarity:97/244 - (39%) Gaps:64/244 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 PPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTET 217
            |.|.:|.|:.:|        .:::|.|..|:.||:..||..||:.||.....|.|:|..:.|.|:
Mouse    32 PGPWASCPAATP--------RKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPES 88

  Fly   218 QVKIWFQNRRYKTKRKQIQQHEAALLGASKRV--------PVQVLVREDG---------STTYAH 265
            :|::||:|||.|.:::|.||..    |...:|        |.:.:..|.|         ||:...
Mouse    89 RVQVWFKNRRAKCRQQQQQQQN----GGQNKVRPAKKKSSPAREVSSESGTSGQFSPPSSTSVPT 149

  Fly   266 MAAPGAGHGL-DPALINIYRHQLQLAYGGLPLPQ--------MQMPFPYFYPQHKVPQPIPPPTQ 321
            :|:..|...: .||.|:             ||..        ||..:|..|            ||
Mouse   150 IASSSAPVSIWSPASIS-------------PLSDPLSTSSSCMQRSYPMTY------------TQ 189

  Fly   322 SSSFVTASSASSSPV-PIPIPGAVRPQRTPCPSPNGQMMSVESGAESVH 369
            :|.:....:.|:|.. .:.....:.|.....|.|...:..:.:.|.:.|
Mouse   190 ASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLPGPGATLSPMGTNAVTSH 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 22/52 (42%)
Otx2NP_001273410.1 Homeobox 50..102 CDD:365835 22/51 (43%)
TF_Otx 161..242 CDD:367546 19/103 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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