Protein Alignment bap and Lhx5

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_620605.1
• Gene: Lhx5 / 124451
• RGDID: 71079
• Length: 402
• Species: Rattus norvegicus
• Alignment Length: 349
• Identity: 76/349 - (21%)
• Similarity: 118/349 - (33%)
• Gaps: 105/349 - (30%)

  Fly    59 ERSISKSPPLCCRD----------LGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATG 113
            |:..|:...|.|::          .|..:...|.::...||....:|..:...:.|.   ..:||
  Rat    41 EKCFSREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNK---QLSTG 102

  Fly   114 ------TSNSSAA--DYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLS---- 166
                  ..|....  ||:.......||..:    :..||......|...||...|.|:..|
  Rat   103 EELYVIDENKFVCKDDYLSSSSLKEGSLNS----VSSCTDRSLSPDLQDPLQDDPKETDNSTSSD 163

  Fly   167 ---------HDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIW 222
                     ...|| ::::..|......|:..|:..||.....:...|.::|:...|....:::|
  Rat   164 KETANNENEEQNSG-TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVW 227

  Fly   223 FQNRRYKTKR-KQIQQHEAALLGASKRV---------PVQVLVRED---GSTTYAHMA------- 267
            |||||.|.:| ||:     :.|||.:..         |:...:.|.   |||.|.:..
  Rat   228 FQNRRSKERRMKQL-----SALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYY 287

  Fly   268 APGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSAS 332
            |||..:..             .|:|  |..|.|.|                  ..|||:.||...
  Rat   288 APGGNYDF-------------FAHG--PPSQAQSP------------------ADSSFLAASGPG 319

  Fly   333 SSPVPIPIPGAVRPQRTPCPSPNG 356
            |:|:     ||:.|   |...|:|
  Rat   320 STPL-----GALEP---PLAGPHG 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	15/52 (29%)
Lhx5	NP_620605.1	LIM1_Lhx1_Lhx5	5..56	CDD:188753	4/14 (29%)
		LIM2_Lhx1_Lhx5	64..119	CDD:188761	9/57 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	124..186		13/66 (20%)
		Homeobox	183..237	CDD:395001	15/53 (28%)
		PHA03378	<247..>392	CDD:223065	28/130 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	298..402		18/66 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910