Protein Alignment bap and lhx6

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_002941184.1
• Gene: lhx6 / 100493242
• XenbaseID: XB-GENE-493341
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 365
• Identity: 70/365 - (19%)
• Similarity: 119/365 - (32%)
• Gaps: 86/365 - (23%)

  Fly     4 MESAGVSAAMAGLSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPL 68
            ::|.|.|.... :|:....|...:..|...:|  ..||..|.|..|..|:.......|...:|.:
 Frog    17 LDSEGDSGGKV-MSQDKQIPRGASRRLDGKSP--HMMSHSDDENMPCSLEKEDHSSPSPPSTPSV 78

  Fly    69 C----------------CRDLGLYKLTQPKEIQPSARQPSNYLQYYAAAMD-----NNNHHHQAT 112
            |                |...||       ||........|.|.::...::     .:...|.:.
 Frog    79 CSPPSSSSSVPSDGKNICSSCGL-------EILDRYLLKVNNLIWHVRCLECSVCRTSLRQHNSC 136

  Fly   113 GTSNSS---AADYMQR---KLAYFGSTLAAPLDMRRCTSNDSD-----CDSPPPLSSSPSESPL- 165
            ...|..   ..||..|   |.|..|..:.|...:||...|...     |.|.....|:..|..|
 Frog   137 YIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLV 201

  Fly   166 --------------------SHDGSGLSRK--------------KRSRAAFSHAQVFELERRFAQ 196
                                :.:|:|::.:              ||:|.:|:..|:..::.:|||
 Frog   202 EEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 266

  Fly   197 QRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGST 261
            ..........::|....|:...:::||||.|.:.| |...||.....|.:   |.::........
 Frog   267 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHK-KHTPQHGVPPQGPT---PTRITSSLSDDL 327

  Fly   262 TYAHMAAPGAG-----HGLDPALINIYRHQLQLAYGGLPL 296
            .::...:|...     ||...:.:...:...:|.|.|.|:
 Frog   328 HFSPFNSPERARMVTLHGYIESQVQCGQMHCRLPYAGPPV 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	13/52 (25%)
lhx6	XP_002941184.1	LIM1_Lhx6	96..149	CDD:188766	9/59 (15%)
		LIM2_Lhx6	157..211	CDD:188768	11/53 (21%)
		Homeobox	249..302	CDD:365835	14/53 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910