DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and fbxl14

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_031754473.1 Gene:fbxl14 / 100487109 XenbaseID:XB-GENE-968324 Length:400 Species:Xenopus tropicalis


Alignment Length:24 Identity:7/24 - (29%)
Similarity:18/24 - (75%) Gaps:0/24 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ISKSPPLCCRDLGLYKLTQPKEIQ 85
            |::.|.|...:|||:::|:.::::
 Frog   377 ITQLPCLKVLNLGLWQMTESEKVR 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475
fbxl14XP_031754473.1 F-box-like 5..46 CDD:403981
AMN1 90..243 CDD:187754
leucine-rich repeat 92..118 CDD:275381
leucine-rich repeat 119..144 CDD:275381
leucine-rich repeat 145..170 CDD:275381
leucine-rich repeat 171..203 CDD:275381
leucine-rich repeat 204..229 CDD:275381
AMN1 228..388 CDD:187754 3/10 (30%)
leucine-rich repeat 230..254 CDD:275381
leucine-rich repeat 255..280 CDD:275381
leucine-rich repeat 281..304 CDD:275381
leucine-rich repeat 307..331 CDD:275381
leucine-rich repeat 332..357 CDD:275381
leucine-rich repeat 358..382 CDD:275381 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165171363
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.