DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx2

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:195 Identity:65/195 - (33%)
Similarity:88/195 - (45%) Gaps:48/195 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 PLDMRRCTSNDSDCDSPPPLSSSPSESPLSH----------DGSGL--SRKKRSRAAFSHAQVFE 189
            |....||.:.   ...|.|.....:|...||          ||...  :.||::|..||.:||::
 Frog    82 PCGAHRCPNR---TQMPSPSQQDYTEEKDSHYPQSLGDRHKDGGDKMGNSKKKTRTVFSRSQVYQ 143

  Fly   190 LERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAA-LLGASKRVPVQV 253
            ||..|..:||||..||:.:|.||:|||||||.||||||.|.||:...:.||| :..||.:..|.:
 Frog   144 LESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTLVGM 208

  Fly   254 -LVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQ-MQMPFPYFYPQHKVPQPI 316
             ||..|.|                     |.|         :|:|: :..|.|.:||...|..|:
 Frog   209 PLVFRDNS---------------------ILR---------VPVPRSIAFPAPLYYPSSNVSLPL 243

  Fly   317  316
             Frog   244  243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 31/52 (60%)
hmx2XP_002937849.1 Homeobox 132..186 CDD:365835 31/53 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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