DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx2

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:195 Identity:65/195 - (33%)
Similarity:88/195 - (45%) Gaps:48/195 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 PLDMRRCTSNDSDCDSPPPLSSSPSESPLSH----------DGSGL--SRKKRSRAAFSHAQVFE 189
            |....||.:.   ...|.|.....:|...||          ||...  :.||::|..||.:||::
 Frog    82 PCGAHRCPNR---TQMPSPSQQDYTEEKDSHYPQSLGDRHKDGGDKMGNSKKKTRTVFSRSQVYQ 143

  Fly   190 LERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAA-LLGASKRVPVQV 253
            ||..|..:||||..||:.:|.||:|||||||.||||||.|.||:...:.||| :..||.:..|.:
 Frog   144 LESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTLVGM 208

  Fly   254 -LVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQ-MQMPFPYFYPQHKVPQPI 316
             ||..|.|                     |.|         :|:|: :..|.|.:||...|..|:
 Frog   209 PLVFRDNS---------------------ILR---------VPVPRSIAFPAPLYYPSSNVSLPL 243

  Fly   317  316
             Frog   244  243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 32/55 (58%)
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649 32/55 (58%)

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