DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and nkx3-3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_002937227.1 Gene:nkx3-3 / 100485176 XenbaseID:XB-GENE-479908 Length:241 Species:Xenopus tropicalis


Alignment Length:317 Identity:103/317 - (32%)
Similarity:132/317 - (41%) Gaps:109/317 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AMAGLSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRD---- 72
            ::.|:|.  .|.|||.|||.|:                                    |||    
 Frog     2 SLTGVSP--LTSFSIQDILART------------------------------------CRDSNGG 28

  Fly    73 ----------LGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKL 127
                      .|..|.|..|...|.                   |...|.|.::...||      
 Frog    29 NEGNGGNGDNTGKAKRTDEKSSTPP-------------------HSPSAEGHNDWPQAD------ 68

  Fly   128 AYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSS-----PSESPLSHDGSGLSRKKRSRAAFSHAQV 187
               ...|....:.....|...|....|..:|:     ||...|..| |..|.|||||||||||||
 Frog    69 ---NPPLTPEKEKTDTDSGTEDSTWEPEAASTGAYTDPSSGDLLGD-SPKSSKKRSRAAFSHAQV 129

  Fly   188 FELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEA--ALLGASKRVP 250
            :||||||:.|||||||||:::|.:|:||||||||||||||||||||.|....|  :.|..:::|.
 Frog   130 YELERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRKLIATQTAPKSSLAPARKVA 194

  Fly   251 VQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFY 307
            |:|||::| ...|.....      |:|:|:::| |..|.             :||.|
 Frog   195 VRVLVKDD-QRQYCPEDI------LNPSLLSLY-HAYQY-------------YPYMY 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 43/52 (83%)
nkx3-3XP_002937227.1 Homeobox 120..174 CDD:365835 44/53 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6576
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003099
OrthoInspector 1 1.000 - - otm49085
Panther 1 1.100 - - O PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4759
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.010

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