Protein Alignment bap and hoxa3

DIOPT Version :10

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001120901.1
• Gene: hoxa3 / 100151729
• XenbaseID: XB-GENE-482267
• Length: 406
• Species: Xenopus tropicalis
• Alignment Length: 381
• Identity: 94/381 - (24%)
• Similarity: 138/381 - (36%)
• Gaps: 144/381 - (37%)

  Fly    19 SLTTPFS---------INDILTRS-NPETRRMSSV-DSEPEPEKLKP--------------SSDR 58
            ||.:|.|         ||:...|: |.::.:...: :.:|.|:...|              ||::
 Frog    50 SLQSPGSAVPHHKANDINESCMRTINSQSNQAPVIPEQQPTPQGPPPSVSPPQTTSNAATASSNK 114

  Fly    59 ERSISKSPPLCCRDLGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYM 123
            ..||: ||            |..|:|.|..::            ...|...|..|:|:|
 Frog   115 ATSIT-SP------------TMSKQIFPWMKE------------SRQNTKQQKAGSSSS------ 148

  Fly   124 QRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVF 188
                   |.:.|.              |..||               |.|..||:|.|::.||:.
 Frog   149 -------GESCAG--------------DKSPP---------------GQSSSKRARTAYTSAQLV 177

  Fly   189 ELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQV 253
            |||:.|...|||..|.|.|||..|.|||.|:||||||||.|.|:.  |:.::.:..:..:.|.:
 Frog   178 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD--QKGKSMMTSSGGQSPCR- 239

  Fly   254 LVREDGSTTYAHMAAPGAGHGLDP--ALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQ-HKVPQP 315
                      :.:..|..|..|:.  :|:|...::          ||....|...:|. :.||.|
 Frog   240 ----------SPVPTPSVGGYLNSMHSLVNSVPYE----------PQSPPAFNKHHPSAYGVPAP 284

  Fly   316 IP------PPTQSSSFVTASSASSSPVPIPIPGAVRPQRTPCPSPNGQMMSVESGA 365
            .|      ||.|.....||              ||.|:..|.|      :...|||
 Frog   285 YPSPHNSCPPHQKRYSGTA--------------AVTPEYEPHP------LQQSSGA 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeodomain	176..232	CDD:459649	32/55 (58%)
hoxa3	NP_001120901.1	Homeodomain	165..221	CDD:459649	32/55 (58%)
		DUF4074	343..404	CDD:463833