DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hoxb5

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:251 Identity:63/251 - (25%)
Similarity:93/251 - (37%) Gaps:89/251 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SARQPS----NYLQYYAAAMDN-NNHHHQATGTSNSSAADY--------MQRKLA---YFGST-- 133
            |.|.|:    :.|.|...:..| :..:.:|.|:...||..|        :.|..|   ::|.:  
 Frog    10 SGRYPNGPDYHVLNYGTGSSSNLSGSYREAAGSMQPSAYGYNYNGMDLSVSRAAASSSHYGDSAF 74

  Fly   134 --------------LAAPLDMRRCTSNDSDCDSP-----------------------------PP 155
                          ||.| |...|..:..|..||                             .|
 Frog    75 PGQESRFRANQSCPLATP-DPLPCAKSHKDELSPTDPATSAGSSAQFTEVEETSASSETEESSTP 138

  Fly   156 LSSSP------SESP--------------------LSHDGSGLSRKKRSRAAFSHAQVFELERRF 194
            .||:|      :.||                    ::||.:| ...||:|.|::..|..|||:.|
 Frog   139 RSSAPPRALQENSSPGAAGTDGQNPQIFPWMRKLHINHDMTG-PDGKRARTAYTRYQTLELEKEF 202

  Fly   195 AQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVP 250
            ...|||:...|.|:|.:|.|:|.|:||||||||.|.|:....:..:...|:|...|
 Frog   203 HFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATGSSAFQP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 26/52 (50%)
hoxb5NP_001094494.1 Homeobox 187..240 CDD:365835 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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