DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and alx4a

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_001340966.1 Gene:alx4a / 100006399 ZFINID:ZDB-GENE-070712-3 Length:368 Species:Danio rerio


Alignment Length:395 Identity:85/395 - (21%)
Similarity:122/395 - (30%) Gaps:177/395 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 YYAAAMDNNNHHH-------QATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSND------- 147
            ||:.:......|.       ||:.|..|.|  ::..|...:|....:|. .:.|.|.|       
Zfish    18 YYSPSAPQGRDHQANPFRTFQASDTKYSPA--FLTNKGQGYGEKSGSPF-QQECQSLDATAGEGT 79

  Fly   148 ----------SDCDSPPPLSSSPSES----------------------------PLSHDGSGLS- 173
                      |.|.:||..|....|:                            |...|||.|| 
Zfish    80 FNKYHLFMQRSSCKTPPDSSKLQQENSGHNGGLIACYGKDSTGLTDSELPQNSDPAGMDGSYLSV 144

  Fly   174 -----------------------------RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMA 209
                                         :|:|:|..|:..|:.|||:.|.:..|.....|.::|
Zfish   145 KDSGVKSPQQATSELASPLDKTEGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 209

  Fly   210 KSLRLTETQVKIWFQNRRYKTKRK----QIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPG 270
            ....|||.:|::||||||.|.:::    |:||                 ||...||.|.      
Zfish   210 LRTDLTEARVQVWFQNRRAKWRKRERFGQMQQ-----------------VRTHFSTAYE------ 251

  Fly   271 AGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSP 335
                                   |||    :..|..|.|          .|:.|::..|||:|  
Zfish   252 -----------------------LPL----LTRPENYAQ----------IQNPSWIGGSSAAS-- 277

  Fly   336 VPIPIPGAVRP--QRTPC-----------------PSPNGQM----MSVESGAESVHSAAEDVDE 377
               |:||.|.|  ..|.|                 |||...|    |....|:..:.:.....|.
Zfish   278 ---PVPGCVVPCDSVTSCMPPHPHAASGVSDFLGVPSPGSHMGQTHMGSLFGSPGMGTGINGYDL 339

  Fly   378 NVEID 382
            |::.|
Zfish   340 NMDPD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 21/52 (40%)
alx4aXP_001340966.1 Homeobox 179..231 CDD:278475 21/51 (41%)
OAR 344..361 CDD:281777 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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