Protein Alignment bap and cdx1b

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001092232.1
• Gene: cdx1b / 100004956
• ZFINID: ZDB-GENE-070615-29
• Length: 255
• Species: Danio rerio
• Alignment Length: 322
• Identity: 72/322 - (22%)
• Similarity: 111/322 - (34%)
• Gaps: 120/322 - (37%)

  Fly    54 PSSDRERSISKSPPLCCRDLGLYKLTQPKEIQPSARQPSNYLQY-YAAAMDNNNHHHQATGTSNS 117
            |:|.|..|::               ..|:...|:..|..::..| :...:..|:.||..||:.|.
Zfish    15 PNSVRHPSLN---------------LNPQNFVPAPPQYPDFTGYHHVPGITTNDPHHSQTGSWNP 64

  Fly   118 SAADYMQRKLAYF-GSTLAAPLDMRRCTSNDSDCDSPPPLSS------------------SPSES 163
            :.....:....|. ||.:::       :|......|||..||                  ||:..
Zfish    65 AYPPPREEWTPYGPGSGVSS-------SSTGQLGFSPPEFSSVQTPGLLQSSINSSVGQLSPNAQ 122

  Fly   164 ------------PLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTE 216
                        |.:..|.....|.:.|..::..|..|||:.|...||::...::|:|.:|.|:|
Zfish   123 RRNPYDWMRRSVPPASSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATALSLSE 187

  Fly   217 TQVKIWFQNRRYKTK---RKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPA 278
            .||||||||||.|.:   :|::||.:.|                  |||
Zfish   188 RQVKIWFQNRRAKERKINKKKMQQPQPA------------------STT---------------- 218

  Fly   279 LINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPI 340
                           .|.|          |...:|..:|..|.|||    ....|.|:|:.|
Zfish   219 ---------------TPTP----------PGSALPGNVPMVTSSSS----GGLVSPPMPMSI 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	24/52 (46%)
cdx1b	NP_001092232.1	Caudal_act	13..132	CDD:282574	25/138 (18%)
		Homeobox	150..202	CDD:278475	24/51 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910