DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and barx2

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:156 Identity:52/156 - (33%)
Similarity:77/156 - (49%) Gaps:32/156 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 NSSAADYMQRKLAYFG---STLAAPLDMRRCTSN---------------DSDCDSP--------P 154
            :....||.: ||:.:.   |.:..|..:..||.:               .|...||        |
Zfish    31 SKETCDYFE-KLSLYSVCPSLIVRPKPLHSCTGSVPLRSYPLLSVITHQASSSVSPLSQSSPHLP 94

  Fly   155 PLSSSP----SESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLT 215
            |.|.:|    |||...|....|.:.:|||..|:..|:..||::|.:|:|||.|:|.::|:||.||
Zfish    95 PSSETPLSISSESDTEHCTPRLKKPRRSRTIFTELQLLGLEKKFQKQKYLSTPDRLDLAQSLGLT 159

  Fly   216 ETQVKIWFQNRRYKTKRKQIQ-QHEA 240
            :.|||.|:||||.|.|:..:: .|||
Zfish   160 QLQVKTWYQNRRMKWKKMVLKGGHEA 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 28/55 (51%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 28/55 (51%)

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