DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and HAT1

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:260 Identity:64/260 - (24%)
Similarity:102/260 - (39%) Gaps:72/260 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TPSPTLDLN---------SSAEVDSLQAPTQKLCVNPLSQRL-METASNSSSLRSIYGSDEGAKK 265
            |.||..:|.         ||::....|. .:|:.||.|...: :|..:..||..|...|....|:
plant    29 TSSPMSNLQMFPWNQTLVSSSDQQKQQF-LRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKR 92

  Fly   266 K-------------DNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELE 317
            :             |:..:|..||..|     |.|:...:.|....|.|.:    .|:.|...||
plant    93 RSTEREGTSGGGCGDDLDITLDRSSSR-----GTSDEEEDYGGETCRKKLR----LSKDQSAVLE 148

  Fly   318 CRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNR--RYKSKRGDIDCEGIAKHLK--------- 371
            ..|:....|...::..:|:||.|:|.||::|||||  |.|.|:.::|||.:.:.::         
plant   149 DTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRL 213

  Fly   372 ---------LKSEP-----LDSPTSLPPPIPNHVMWPPTMQQSQQQQQHHAQQQ-------QMQH 415
                     ||..|     :..||:|       :|.|...:.:.....:|.|:.       ||.|
plant   214 EKEAAELRALKLSPRLYGQMSPPTTL-------LMCPSCERVAGPSSSNHNQRSVSLSPWLQMAH 271

  Fly   416  415
            plant   272  271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 20/57 (35%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:461370 17/69 (25%)
HOX 134..188 CDD:197696 21/57 (37%)
HALZ 190..233 CDD:128634 7/42 (17%)

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