DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and HDG1

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_191674.1 Gene:HDG1 / 825287 AraportID:AT3G61150 Length:808 Species:Arabidopsis thaliana


Alignment Length:251 Identity:57/251 - (22%)
Similarity:101/251 - (40%) Gaps:53/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 AGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAP 230
            ||||......|...:::::....:.|.|.               :.||.:|..:||.....||  
plant    11 AGASKLLSDAPYNNHFSFSAVDTMLGSAA---------------IAPSQSLPFSSSGLSLGLQ-- 58

  Fly   231 TQKLCVNPLSQRLMETASNSSSLRSIYGSD-EGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSG 294
                 .|....|..|...::.|.:|..|.| |...:.||::           ::||:....|:  
plant    59 -----TNGEMSRNGEIMESNVSRKSSRGEDVESRSESDNAE-----------AVSGDDLDTSD-- 105

  Fly   295 STKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRG 359
              :|..|:|.....:..|:.:||..|:...:....:|..::::|||...|||.||||||.:.|  
plant   106 --RPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMK-- 166

  Fly   360 DIDCEGIAKHL---------KLKSEPLDSPTSLPPPIPNHVMWPPTMQQSQQQQQH 406
                ..|.:|.         ||::|.:....::..|:..:...|..:.:...::||
plant   167 ----TQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQH 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 19/55 (35%)
HDG1NP_191674.1 COG5576 69..185 CDD:227863 34/136 (25%)
Homeobox 113..166 CDD:278475 17/52 (33%)
START_ArGLABRA2_like 314..537 CDD:176884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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