DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and HAT3

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_191598.1 Gene:HAT3 / 825210 AraportID:AT3G60390 Length:315 Species:Arabidopsis thaliana


Alignment Length:320 Identity:80/320 - (25%)
Similarity:118/320 - (36%) Gaps:88/320 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 DDGATTSSSL---------SPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHS------A 154
            |||...|.||         |..|.|.|   ...|.......||.|.::.|| |..|::      :
plant     5 DDGLGLSLSLSLGFNQKDPSSRLNPMP---LASYASSSHMQHMQQSNYNHP-QKIQNTWINMFQS 65

  Fly   155 SAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAV--GIKSEYIPTPYVTPSPTLD 217
            |..|.....|..|.......:....:....|:|.....:|.|:|  |.|||              
plant    66 SERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSE-------------- 116

  Fly   218 LNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNS 282
                                   :.||..|          |:..|.:.:||      ..|....|
plant   117 -----------------------RELMAAA----------GAVGGGRVEDN------EIERASCS 142

  Fly   283 ISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKI 347
            :.|.|:....||:.....::|.|:  |:.|.|.||..|:....|...::..:|::|||...||::
plant   143 LGGGSDDEDGSGNGDDSSRKKLRL--SKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEV 205

  Fly   348 WFQNR--RYKSKRGDIDCEGI---AKHLKLKSEPLDSPTS------LPPPIPNHVMWPPT 396
            |||||  |.|.|:.::|||.:   .::|..::..|....|      |.|.:..| |.|||
plant   206 WFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMH-MKPPT 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 22/57 (39%)
HAT3NP_191598.1 HD-ZIP_N 19..118 CDD:461370 25/139 (18%)
Homeodomain 161..215 CDD:459649 21/55 (38%)
HALZ 217..260 CDD:128634 10/43 (23%)

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