DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and HB20

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_186771.1 Gene:HB20 / 821232 AraportID:AT3G01220 Length:286 Species:Arabidopsis thaliana


Alignment Length:185 Identity:42/185 - (22%)
Similarity:71/185 - (38%) Gaps:66/185 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 SNPGSNS--GSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREI-IAQKLNLSATQVKIW 348
            |:.|:::  |..|.|::.:        ||..||..|.|...|. .||:| :|:.|.:...|:.||
plant    76 SDDGAHTMLGEKKKRLQLE--------QVKALEKSFELGNKLE-PERKIQLAKALGMQPRQIAIW 131

  Fly   349 FQNR--RYKSKRGDIDCEGIAKHL---------------KLKSEPL------------------- 377
            ||||  |:|:::.:.|.:.:.|..               ||.:|.:                   
plant   132 FQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNEGNIVKREAEA 196

  Fly   378 ----------DSPTSLPPP---IPNHV-----MWPPTMQQSQQQQQHHAQQQQMQ 414
                      .|..:|..|   |..||     ::|.:::.|.....||...:.:|
plant   197 SWSNNGSTENSSDINLEMPRETITTHVNTIKDLFPSSIRSSAHDDDHHQNHEIVQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 21/58 (36%)
HB20NP_186771.1 HOX 87..140 CDD:197696 22/61 (36%)
HALZ 142..183 CDD:280364 5/40 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I2435
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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