DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and NKX2-1

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001073136.1 Gene:NKX2-1 / 7080 HGNCID:11825 Length:401 Species:Homo sapiens


Alignment Length:448 Identity:113/448 - (25%)
Similarity:158/448 - (35%) Gaps:175/448 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QAQSGGYYDHYTQSPSPGSLTNADAL-----NTTPFSVKDILNMVNQTEAYEGSYGHIDGAATAS 67
            :|.:||       ..|||.|:....:     :||||||.|||:.:.::....|..|...||..|:
Human    13 EAAAGG-------RSSPGRLSRRRIMSMSPKHTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAA 70

  Fly    68 ALFAAGEYQNPHQYLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDY 132
                            ::|.|.:                              ||          
Human    71 ----------------YRQGQAA------------------------------PP---------- 79

  Fly   133 GMPAHMFQHHHGHPHQSFQHSA--SAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATP 195
              .|.|.||..||      |.|  :||:|:|    ||....::              ...||...
Human    80 --TAAMQQHAVGH------HGAVTAAYHMTA----AGVPQLSH--------------SAVGGYCN 118

  Fly   196 SAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSD 260
            ..:|..|| :| ||                                  .:|..||:|....||::
Human   119 GNLGNMSE-LP-PY----------------------------------QDTMRNSASGPGWYGAN 147

  Fly   261 EGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKP---RMKRKPRVLFSQAQVLELECRFRL 322
            ...:....|:.....|.:..:.:.|..:.|..|.:..|   ..:||.|||||||||.|||.||:.
Human   148 PDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQ 212

  Fly   323 KKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------------------GDIDC--- 363
            :|||:..|||.:|..::|:.|||||||||.|||.||                     |...|   
Human   213 QKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQ 277

  Fly   364 --------EGIAKHLKLKSEPLDSPTSLPPPIPNHVMWPPTMQ-QSQQQQQHHAQQQQ 412
                    ..:|..:.:|.   ..|.....|.|.    ..::| .:|||.||.||..|
Human   278 QQAQQQSPRRVAVPVLVKD---GKPCQAGAPAPG----AASLQGHAQQQAQHQAQAAQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 36/55 (65%)
NKX2-1NP_001073136.1 Homeobox 194..247 CDD:278475 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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