Protein Alignment tin and hoxc12b

DIOPT Version :10

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_571620.1
• Gene: hoxc12b / 58062
• ZFINID: ZDB-GENE-000329-17
• Length: 283
• Species: Danio rerio
• Alignment Length: 256
• Identity: 74/256 - (28%)
• Similarity: 107/256 - (41%)
• Gaps: 51/256 - (19%)

  Fly   118 LPPPPHQLYGGYQDYGMPAHMFQHHHGHP---HQSFQHSASAYNMSASQFYAGASATAYQTPATY 179
            ||..|.:...||.         |.|...|   :.::..|........::.:...||.|.......
Zfish    53 LPWNPSEACSGYP---------QSHISGPVTLNHTYNQSCDITRQEDNKCFYSDSACATSGGGDN 108

  Fly   180 NYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLN------SSAEVDSLQAPTQKLCVNP 238
            |.....|.|  |....|:|.|.:|         :...:||      |.::.|.| .|.::...||
Zfish   109 NSTNLISKE--GALDNSSVSITAE---------NGQNNLNGMDNGGSYSKYDCL-TPAEQPIPNP 161

  Fly   239 LSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGS------TK 297
            ...|.:|:.|..|.:      :|||  |.:|.:|.|   |....|. .|....|.|:      .:
Zfish   162 RLCRSLESVSGCSFI------NEGA--KTSSGITHS---LTSPDIQ-TSVAALNGGALWYPMHRQ 214

  Fly   298 PRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR 358
            .|.||||   :|:.|:.|||..|.|.:::|...|..::.:|||:..||||||||||.|.||
Zfish   215 TRKKRKP---YSKLQLNELEGEFILNEFITRQRRRELSDRLNLTDQQVKIWFQNRRMKKKR 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	Homeodomain	302..358	CDD:459649	26/55 (47%)
hoxc12b	NP_571620.1	Homeodomain	216..272	CDD:459649	28/58 (48%)