DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and hoxa11a

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001428668.1 Gene:hoxa11a / 58061 ZFINID:ZDB-GENE-000823-8 Length:284 Species:Danio rerio


Alignment Length:266 Identity:71/266 - (26%)
Similarity:105/266 - (39%) Gaps:73/266 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LPPPPHQLYGGYQDYGM-PAHMFQHH----HGHPHQSFQH-----------------SASAYNMS 160
            ||...|.....::||.: |:..:.|.    |.:|.:...|                 :||||..|
Zfish    52 LPQVQHVREVTFRDYAIDPSTKWPHRGPLAHCYPSEDSVHRECLPAVTTVGEMFPKNNASAYYHS 116

  Fly   161 ASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVD 225
            .|           .|.:..|: |...|.  .|..|.|.   .::..|.|.        .|.:.||
Zfish   117 TS-----------NTTSASNF-YGNVGR--NGVLPQAF---DQFFDTAYG--------GSDSVVD 156

  Fly   226 SLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNSISGNS--- 287
            :..|...|          |.::..|:...:.....||.::.:.|...||         |||:   
Zfish   157 NDYAARDK----------MHSSKQSTPAPAPEQQPEGKERPETSSPESS---------SGNNEEK 202

  Fly   288 NPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNR 352
            ..|:|||   ||. ||.|..:::.|:.|||..|....|:...:|..:::.|||:..|||||||||
Zfish   203 TSGANSG---PRF-RKKRCPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR 263

  Fly   353 RYKSKR 358
            |.|.|:
Zfish   264 RMKEKK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 24/55 (44%)
hoxa11aNP_001428668.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..214 17/73 (23%)

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