Protein Alignment tin and hoxc1a

DIOPT Version :10

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_571606.1
• Gene: hoxc1a / 58046
• ZFINID: ZDB-GENE-000822-2
• Length: 302
• Species: Danio rerio
• Alignment Length: 373
• Identity: 92/373 - (24%)
• Similarity: 124/373 - (33%)
• Gaps: 131/373 - (35%)

  Fly    62 GAATASALFAAGEYQNPHQYLNHQQH-QQSELPIPQQ--------QLHHQHLDDGATTSSS---- 113
            |....::||..|.:......| ||.| ..::.|..:.        |.|..:|...||.:.|
Zfish     6 GFRDTTSLFIKGYHATGVMRL-HQDHGSTADFPSREDVNNEADFLQYHFTNLCATATGACSKPCE 69

  Fly   114 ----LSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQ----SFQH------SASAYNMSASQF 164
                .:...||.|..     ||:..|.        ||::    |||.      |...::.|:..|
Zfish    70 DPGRANSTRPPFPQN-----QDFYRPV--------HPNRPQVPSFQSCREQGLSRKGFSPSSDTF 121

  Fly   165 YAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQA 229
            ...:||.....|..                                        |:..||.:...
Zfish   122 RTFSSAHCELGPVN----------------------------------------NTQTEVRTYDG 146

  Fly   230 PTQKLCV----------NPLSQRL--------METASNSSSLRSIYGSDEGAKKKDNSQVTSSRS 276
            |.:...|          |.|::.|        |....|.|....|    :..|..|.
Zfish   147 PVRHSAVEDDNTGHGALNTLNETLHSGKTFEWMRVRRNQSRAAKI----QLGKCSDR-------- 199

  Fly   277 ELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLS 341
            ||:.|....:....|:.||         |..|:..|:.|||..|...||||.|.|..||..|.||
Zfish   200 ELKTNHGRDSDEDTSSGGS---------RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLS 255

  Fly   342 ATQVKIWFQNRRYKSKRGDIDCEGIAKHLKL---------KSEPLDSP 380
            .|||||||||||.|.|:  :..||:|:.|.|         ||:...||
Zfish   256 ETQVKIWFQNRRMKQKK--MLREGLAQGLMLISGCDEDSKKSDTCSSP 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	Homeodomain	302..358	CDD:459649	30/55 (55%)
hoxc1a	NP_571606.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..224		9/42 (21%)
		Homeodomain	218..272	CDD:459649	31/62 (50%)