DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Antp

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:378 Identity:90/378 - (23%)
Similarity:129/378 - (34%) Gaps:82/378 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TEAYEGS---YGHIDGAATASALFAAGEYQNPHQYLNHQQHQQSELPIPQ--------------- 96
            |.:|.|:   :||..|......     :.|..|.|..:..| |..:|.|:               
  Fly    16 TNSYMGADMHHGHYPGNGVTDL-----DAQQMHHYSQNANH-QGNMPYPRFPPYDRMPYYNGQGM 74

  Fly    97 -QQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHP--HQSFQHSASAYN 158
             ||..||......:.||.:..::|..  |..|   ..|:|... |.....|  :|..|.:..|..
  Fly    75 DQQQQHQVYSRPDSPSSQVGGVMPQA--QTNG---QLGVPQQQ-QQQQQQPSQNQQQQQAQQAPQ 133

  Fly   159 MSASQFYAGASATAY-----QTPATY-----NYNYAGSGEVYGGATPSAVGIKSEY-----IPTP 208
            ....|.........:     |.|..|     .....|.|.|..|.:|..|...|.:     :..|
  Fly   134 QLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLP 198

  Fly   209 YVTPSPTLDLNSS-------AEV----DSLQAPTQKLCVNPLS---QRLMETASNSSSLRSIY-G 258
            :....|...|..:       .||    .::....|:..|.|:.   |.:|........:...: |
  Fly   199 HHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPG 263

  Fly   259 SDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLK 323
            ......:..|||.:...|.|         .|...|...|.:.:::.|..:::.|.||||..|...
  Fly   264 QHTPPSQNPNSQSSGMPSPL---------YPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFN 319

  Fly   324 KYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEP 376
            :|||...|..||..|.|:..|:||||||||.|.|          |..|.|.||
  Fly   320 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK----------KENKTKGEP 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 25/55 (45%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 27/153 (18%)
Homeodomain 298..354 CDD:459649 26/65 (40%)

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