Protein Alignment tin and cdx4

DIOPT Version :10

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_989417.1
• Gene: cdx4 / 395056
• XenbaseID: XB-GENE-482787
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 335
• Identity: 79/335 - (23%)
• Similarity: 118/335 - (35%)
• Gaps: 123/335 - (36%)

  Fly    65 TASALFAAGEYQNPHQYLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGY 129
            :||...:|..|.:...|.|:..:            ||                :||...|
 Frog    23 SASNNHSAQNYASNQPYFNYVTY------------HH----------------VPPMDEQ----- 54

  Fly   130 QDYGMPAHMFQHHHGHPHQSF-QHSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGA 193
               |.|..::...:|.|.:.: .:.|...|.:.:|       ::..:|..:.||.:|    |...
 Frog    55 ---GQPCGVWGPQYGSPREQWNSYGAGPSNTNMAQ-------SSDLSPNQFAYNSSG----YSSP 105

  Fly   194 TPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYG 258
            .||..||                 |:|   ||                 |..||:||.
 Frog   106 HPSGTGI-----------------LHS---VD-----------------LSHTAANSP------- 126

  Fly   259 SDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLK 323
                             |:|.:||.........::.:.|.|.|.|.||:::..|.||||..|...
 Frog   127 -----------------SDLSQNSYEWMGKTVQSTSTGKTRTKEKYRVVYTDHQRLELEKEFHYS 174

  Fly   324 KYLTGAEREIIAQKLNLSATQVKIWFQNRR------YKSKRGDIDCEGIAKHLKLKSEPLDSPTS 382
            :|:|...:..:|..|.||..||||||||||      :|.|....|  ||.      |...||.::
 Frog   175 RYITIRRKTELAASLRLSERQVKIWFQNRRAKERKLFKKKMNQFD--GIC------SVQSDSSSA 231

  Fly   383 LPPPIPNHVM 392
            .|.|:.:.|:
 Frog   232 SPNPLCDSVV 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	Homeodomain	302..358	CDD:459649	26/61 (43%)
cdx4	NP_989417.1	Caudal_act	16..147	CDD:461413	40/231 (17%)
		Homeodomain	154..209	CDD:459649	25/54 (46%)