DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Dbx

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:474 Identity:114/474 - (24%)
Similarity:160/474 - (33%) Gaps:160/474 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TQSPSPGSLTNADALNTTP---FSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQNP-- 78
            |..|:.|:....|. |:.|   |||..||                  ..|...:....|:..|  
  Fly   134 TSMPTVGNTILKDT-NSKPILKFSVSAIL------------------GDTREGVRVRNEFMQPQH 179

  Fly    79 --------------HQYLNHQQHQQ-------SELPIPQQQ------LHHQHLDDGATTSSSLSP 116
                          |||..|.|.||       ..|.:|..|      .||.|...||..:....|
  Fly   180 IWPYLQQNFMQQHSHQYQQHHQQQQPHSHPQHQPLAVPGHQHSHPHSHHHHHHHPGAGHAHFPHP 244

  Fly   117 LL---PPPPHQLYGGYQDYGMPAHMFQHHHGH---PHQSFQHSASAYNMSASQFYAGASATAYQT 175
            ..   ..||||.:...|      |:.|.|.|:   |..:...|:....:|.|....|||      
  Fly   245 AFLTHQLPPHQHHQQQQ------HVQQQHPGNSCQPQTASSSSSPGSTISDSDNNHGAS------ 297

  Fly   176 PATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLS 240
              |.|.|.:|:|.....|.|..:.                   ||:.:.||           ..|
  Fly   298 --TANGNGSGTGNSGQDARPHELA-------------------NSNPDEDS-----------SAS 330

  Fly   241 QRLMETASNSSSLRSIYGSDEG---------------------AKKK------------DNSQVT 272
            :||.:.......|....|:..|                     ||..            ::..:.
  Fly   331 RRLTQDKQQQQQLLGAGGTGGGGGGGHGHGHPTPPPPPPPPVIAKPMPSRPTPFLPHTLNHPHLH 395

  Fly   273 SSRSELRKNSIS----------GNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLT 327
            |..:..|...:|          |...|.::|...|||.....|.:||.:|...||.||:.:||::
  Fly   396 SLLAHCRNPYMSVGAQVFPLPPGQGFPWAHSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYIS 460

  Fly   328 GAEREIIAQKLNLSATQVKIWFQNRRYK---SKRGDIDCEGIAKHLKL--KSEP--------LDS 379
            ..:|:.:|::|.|..:||||||||||.|   ||..::...|.::...|  |:.|        .|.
  Fly   461 KPDRKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDR 525

  Fly   380 P-TSLPPPI--PNHVMWPP 395
            | |.|.|.:  ||....||
  Fly   526 PLTPLSPSLLSPNGSATPP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 26/58 (45%)
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 25/53 (47%)

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