DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and H2.0

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:392 Identity:90/392 - (22%)
Similarity:131/392 - (33%) Gaps:169/392 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YDHYTQSP--SPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQN 77
            :.|.|..|  :|.|      .:|.||        |...:.:.|.|.........:.:.|| |:..
  Fly   125 FGHATLPPTFTPTS------SHTYPF--------VGLDKLFPGPYMDYKSVLRPTPIRAA-EHAA 174

  Fly    78 P-------HQYLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMP 135
            |       :..|...|||:.:   .||..||||                   |           |
  Fly   175 PTYPTLATNALLRFHQHQKQQ---HQQHHHHQH-------------------H-----------P 206

  Fly   136 AHMFQHHHGHPHQSFQ--------HSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGG 192
            .|:.|.|...||.|..        ||.::..::..|                 ..:.|.      
  Fly   207 KHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQ-----------------QRFLGK------ 248

  Fly   193 ATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIY 257
                              ||...||:          |||     :|.:      |:.::|....:
  Fly   249 ------------------TPQQLLDI----------APT-----SPAA------AAAATSQNGAH 274

  Fly   258 GSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRK---PRVLFSQAQVLELECR 319
            |...|     |.|              ||::.|||.       |||   .|.:||..|...||.:
  Fly   275 GHGGG-----NGQ--------------GNASAGSNG-------KRKRSWSRAVFSNLQRKGLEIQ 313

  Fly   320 FRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLK--LKSEPLDSPTS 382
            |:.:||:|..:|..:|.:|||:..|||:||||||.|           .:|.:  |||.....|::
  Fly   314 FQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMK-----------WRHTRENLKSGQEKQPSA 367

  Fly   383 LP 384
            :|
  Fly   368 VP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 27/58 (47%)
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 28/70 (40%)

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