Protein Alignment tin and Hoxc13

DIOPT Version :9

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: XP_235695.3
• Gene: Hoxc13 / 315337
• RGDID: 1563984
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 294
• Identity: 76/294 - (25%)
• Similarity: 110/294 - (37%)
• Gaps: 58/294 - (19%)

  Fly   107 GATTSSSLSPLLPPP----PHQLYGG-----YQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSAS 162
            |:..:|....|||.|    |....|.     |.|...|                        .|:
  Rat    60 GSCPASHCRDLLPHPVLARPPAPLGAPQGAVYTDIPAP------------------------EAA 100

  Fly   163 QFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSE---YIP-TPYVTPSPTL---DLNS 220
            :..|...|....:.||..|.|...|..||......|.::.:   |.| ..|..||..|   ||:|
  Rat   101 RQCAPPPAPPTSSSATLGYGYPFGGSYYGCRLSHNVNLQQKPCSYHPGDKYPEPSGALPGDDLSS 165

  Fly   221 SAE--------VDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKD-NSQVTSSRS 276
            .|:        ..|.||....|.|:.:............:|..:.|....|.... :|||..|:.
  Rat   166 RAKEFAFYPSFASSYQAMPGYLDVSVVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKE 230

  Fly   277 ELRKNSISGNSNPGSNSGSTKP-----RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQ 336
            :.:...:.  .:|..:....:|     |..||.||.:::.|:.|||..:...|::|..:|..|:.
  Rat   231 QSQSAHLW--KSPFPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISA 293

  Fly   337 KLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHL 370
            ..|||..||.|||||||.|.|:  :..:..|.||
  Rat   294 TTNLSERQVTIWFQNRRVKEKK--VVSKSKAPHL 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	HOX	301..357	CDD:197696	25/55 (45%)
Hoxc13	XP_235695.3	HoxA13_N	52..164	CDD:289085	29/127 (23%)
		HOX	258..310	CDD:197696	22/51 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000