Protein Alignment tin and Hoxd13

DIOPT Version :9

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_001099356.1
• Gene: Hoxd13 / 288154
• RGDID: 1308417
• Length: 331
• Species: Rattus norvegicus
• Alignment Length: 321
• Identity: 79/321 - (24%)
• Similarity: 121/321 - (37%)
• Gaps: 74/321 - (23%)

  Fly    63 AATASALFAAGEYQNPHQYLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLP-------- 119
            ||.|:|..||..:..|         ..||             ..|:::|||.|.::.
  Rat    50 AAAAAAAAAASSFAYP---------GTSE-------------RTGSSSSSSSSAVIATRPEAPVA 92

  Fly   120 ---PPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSASQFYAGASATAYQTPATYNY 181
               |.|..........|.||..:.:|.|:.:.|.:.|               .....|..|..:.
  Rat    93 KECPAPAAAATAAAPPGAPALGYGYHFGNGYYSCRMS---------------HGVGLQQNALKSS 142

  Fly   182 NYAGSG----EVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQR 242
            .:|..|    |.|...:    |:.|..:||..| |:      .:.||...|..|......|....
  Rat   143 PHASLGGFPVEKYMDVS----GLASSSVPTNEV-PA------RAKEVSFYQGYTSPYQHVPGYID 196

  Fly   243 LMETASNSSSLRSIYGSDEGAKKKD-----NSQVTSSRSELRKNSISGNSNPGSNSGSTKP---- 298
            ::.|..:.......|.|.||.:...     ||||..::.:.:.:....:|.|| :....:|
  Rat   197 MVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVYCAKDQPQGSHFWKSSFPG-DVALNQPDMCV 260

  Fly   299 -RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR 358
             |..||.||.:::.|:.|||..:.:.|::...:|..|:...|||..||.|||||||.|.|:
  Rat   261 YRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	HOX	301..357	CDD:197696	24/55 (44%)
Hoxd13	NP_001099356.1	HoxA13_N	<113..162	CDD:289085	11/67 (16%)
		homeodomain	265..321	CDD:238039	24/55 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910