Sequence 1: | NP_524433.1 | Gene: | tin / 42536 | FlyBaseID: | FBgn0004110 | Length: | 416 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006240178.1 | Gene: | Nkx2-1 / 25628 | RGDID: | 3866 | Length: | 423 | Species: | Rattus norvegicus |
Alignment Length: | 454 | Identity: | 109/454 - (24%) |
---|---|---|---|
Similarity: | 148/454 - (32%) | Gaps: | 205/454 - (45%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 HYTQSP-SPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQNPHQ 80
Fly 81 YLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGH 145
Fly 146 PHQSFQHSA--SAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTP 208
Fly 209 YVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTS 273
Fly 274 SRSELRKNSISGNSNPGSNSGSTKP---RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIA 335
Fly 336 QKLNLSATQVKIWFQNRRYKSKR----------------------GDIDCEGIAKHLKLKSEPLD 378
Fly 379 SPTSLPPPIPNHVMWPPTMQQSQQQQ----------------------------QHHAQQQQMQ 414 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tin | NP_524433.1 | HOX | 301..357 | CDD:197696 | 36/55 (65%) |
Nkx2-1 | XP_006240178.1 | Homeobox | 215..268 | CDD:278475 | 34/52 (65%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0842 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |