DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Nkx2-4

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_075993.1 Gene:Nkx2-4 / 228731 MGIID:97349 Length:354 Species:Mus musculus


Alignment Length:419 Identity:107/419 - (25%)
Similarity:154/419 - (36%) Gaps:146/419 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NTTPFSVKDILNMVNQTEAYEGSYGHIDGAATA-SALFAAGEYQNPHQYLNHQQHQQSELPIPQQ 97
            :||||||.|||:.:.:|  |:...|.:|||... .|...|..|:.|                   
Mouse     7 HTTPFSVSDILSPIEET--YKKFGGVMDGAPPGLGAPLGAAAYRAP------------------- 50

  Fly    98 QLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSAS 162
                   ..|.::.::.......|||.:.|                        |:|:| ..:|:
Mouse    51 -------PSGPSSQAAAVAAGMQPPHAMAG------------------------HNAAA-AAAAA 83

  Fly   163 QFYAGASATAYQTPATYNYNYAGSGE------------------VYGGATPSAVGIKSEYIPTPY 209
            ...|.|:||.:..|....:.::..|.                  :.|||..:|.|          
Mouse    84 AAAAAAAATYHMPPGVSQFPHSAMGSYCNGGLGNMGELPAYTDGMRGGAAAAATG---------- 138

  Fly   210 VTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETAS--NSSSLRSIYGSDEGAKKKDNSQVT 272
                 ....|:.....|:             .|.|..::  |.:.:.|:.|..:.||        
Mouse   139 -----WYGANTDPRYSSI-------------SRFMGPSAGVNVAGMGSLTGIADAAK-------- 177

  Fly   273 SSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQK 337
             |.:.|.               :..||.||  |||||||||.|||.||:.:|||:..|||.:|..
Mouse   178 -SLAPLH---------------AAAPRRKR--RVLFSQAQVYELERRFKQQKYLSAPEREHLASM 224

  Fly   338 LNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPPPIPNHVMWP-------- 394
            ::|:.|||||||||.|||.||...|  ..|:.|: :...|..|...|||.|..|..|        
Mouse   225 IHLTPTQVKIWFQNHRYKMKRQAKD--KAAQQLQ-QEGGLGPPPPPPPPSPRRVAVPVLVKDGKP 286

  Fly   395 -------PTMQQSQQQQQHHAQQQQMQHM 416
                   ||..|..||.|......:::.:
Mouse   287 CQNGAGTPTPGQGGQQPQAPTPAPELEEL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 36/55 (65%)
Nkx2-4NP_075993.1 Homeobox 191..244 CDD:278475 35/54 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..329 18/74 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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