DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and ceh-5

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_492586.2 Gene:ceh-5 / 191616 WormBaseID:WBGene00000430 Length:134 Species:Caenorhabditis elegans


Alignment Length:105 Identity:38/105 - (36%)
Similarity:52/105 - (49%) Gaps:24/105 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 SNSGSTK----------PRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQV 345
            |.:||.|          .|.|| ||.:|:..|:.:||..|....||:|:.|..:|:.|.||..||
 Worm    16 SANGSEKMLEIPAKLDLERPKR-PRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQV 79

  Fly   346 KIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPP 385
            |:||||||.|.|:.|            ..:|: .|.:|.|
 Worm    80 KVWFQNRRTKQKKID------------SRDPI-KPETLKP 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 26/55 (47%)
ceh-5NP_492586.2 Homeodomain 36..92 CDD:459649 27/56 (48%)

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