DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Nkx2-5

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus


Alignment Length:374 Identity:94/374 - (25%)
Similarity:120/374 - (32%) Gaps:175/374 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PSPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDG-----AATASALFAAGE---YQNP 78
            |||       ||..||||||||||:..|..:.  :.|.:..     .|.||.:.||.:   |..|
Mouse     3 PSP-------ALTPTPFSVKDILNLEQQQRSL--ASGDLSARLEATLAPASCMLAAFKPEAYSGP 58

  Fly    79 HQYLNHQQHQQSEL-PIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHH 142
            ....:.....::|: |.|              :....||..|..|                    
Mouse    59 EAAASGLAELRAEMGPAP--------------SPPKCSPAFPAAP-------------------- 89

  Fly   143 HGHPHQSFQHSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPT 207
                                .||.||                                       
Mouse    90 --------------------TFYPGA--------------------------------------- 95

  Fly   208 PYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVT 272
             |..|.|..|         .:|..::||                                   ..
Mouse    96 -YGDPDPAKD---------PRADKKELC-----------------------------------AL 115

  Fly   273 SSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQK 337
            ....||.|....|...|       :.|.:||||||||||||.|||.||:.::||:..||:.:|..
Mouse   116 QKAVELDKAETDGAERP-------RARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASV 173

  Fly   338 LNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPPP 386
            |.|::|||||||||||||.||...|     :.|:|...|       |||
Mouse   174 LKLTSTQVKIWFQNRRYKCKRQRQD-----QTLELLGPP-------PPP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 37/55 (67%)
Nkx2-5NP_032726.1 Homeobox 144..194 CDD:365835 31/49 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I4814
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.920

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