DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Nkx2-3

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_032725.1 Gene:Nkx2-3 / 18089 MGIID:97348 Length:362 Species:Mus musculus


Alignment Length:378 Identity:100/378 - (26%)
Similarity:131/378 - (34%) Gaps:160/378 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PSPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQNPHQYLNHQQ 86
            |||        :.:||||||||||:..|.        |..||                       
Mouse     4 PSP--------VTSTPFSVKDILNLEQQR--------HFHGA----------------------- 29

  Fly    87 HQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQ 151
            |.|:||.                                              ||.|..|..   
Mouse    30 HLQAELE----------------------------------------------QHFHSAPCM--- 45

  Fly   152 HSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTL 216
                             .|||..|      .::.:||    ......|.|..|            
Mouse    46 -----------------LATAEGT------QFSDAGE----EDEEEEGEKLSY------------ 71

  Fly   217 DLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRS----E 277
             |||.|..:.  .....||.......::..|.:             ..|:...:|.|.||    :
Mouse    72 -LNSLAAAEG--HGDSGLCPQSYVHTVLRDACS-------------GPKEQEEEVVSERSQKSCQ 120

  Fly   278 LRKN-SISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLS 341
            |:|: ..:|:.....:....|||.:||||||||||||.|||.||:.::||:..|||.:|..|.|:
Mouse   121 LKKSLEAAGDCKTSEDGERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLT 185

  Fly   342 ATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPPPIPNHVMWP 394
            :|||||||||||||.||            :.:.:.|:..|..|||.|..|..|
Mouse   186 STQVKIWFQNRRYKCKR------------QRQDKSLELGTHAPPPPPRRVAVP 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 38/55 (69%)
Nkx2-3NP_032725.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..149 6/22 (27%)
HOX 145..201 CDD:197696 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..222 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I4814
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.920

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