DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Nkx2-2

DIOPT Version :9

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_035049.1 Gene:Nkx2-2 / 18088 MGIID:97347 Length:273 Species:Mus musculus


Alignment Length:248 Identity:79/248 - (31%)
Similarity:109/248 - (43%) Gaps:48/248 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 GEVYGGATPSAVGIKSEYIPTPYVTPSP----TLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETA 247
            |.|..|....:.|      |.|.....|    .||...|.   .|::|......||.::.|   |
Mouse    26 GSVAEGPEEESEG------PEPAKRAGPLGQGALDAVQSL---PLKSPFYDSSDNPYTRWL---A 78

  Fly   248 SNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQ 312
            |......|::|....|..:|    :||:|.......|.:::..:..|......|||.|||||:||
Mouse    79 STEGLQYSLHGLAASAPPQD----SSSKSPEPSADESPDNDKETQGGGGDAGKKRKRRVLFSKAQ 139

  Fly   313 VLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPL 377
            ..|||.|||.::||:..|||.:|..:.|:.|||||||||.|||.||...: :|      ::..||
Mouse   140 TYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAE-KG------MEVTPL 197

  Fly   378 DSPTSLPPPI------PNHV-----MWPPTMQ----------QSQQQQQHHAQ 409
            .||..:..|:      |.|.     :...|.|          ||.|..|::||
Mouse   198 PSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPFSAYSAQSLQHMQYNAQ 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 HOX 301..357 CDD:197696 35/55 (64%)
Nkx2-2NP_035049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..131 9/43 (21%)
Homeobox 131..185 CDD:395001 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I4814
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002404
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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