DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and Hoxb9

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus


Alignment Length:251 Identity:71/251 - (28%)
Similarity:106/251 - (42%) Gaps:44/251 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSASQFYAGASATAYQTPATYNYNYA 184
            ||.....|.|.:...|.|  ..|...|..|||..|..:..|.:.....||.:   .|:.|:....
Mouse    24 PPAKFPSGQYANPRQPGH--AEHLDFPSCSFQPKAPVFGASWAPLSPHASGS---LPSVYHPYLQ 83

  Fly   185 GSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDL-----NSSAEVDSLQAPTQKLCVNPLSQRLM 244
            ..|      .|:|   :|.|:.| ::.|:|..:.     .::.:.:.|.....:|......:..:
Mouse    84 PQG------APAA---ESRYLRT-WLEPAPRAEAAPGQGQAAVKAEPLLGAPGELLKQGTPEYSL 138

  Fly   245 ETASNS----SSLRSIYGSD---EGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKR 302
            ||::..    |:.|:.||.:   ||::.|:....|               ||.:|  ....|..|
Mouse   139 ETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQT---------------NPSAN--WLHARSSR 186

  Fly   303 KPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR 358
            |.|..:::.|.||||..|....|||...|..:|:.||||..||||||||||.|.|:
Mouse   187 KKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 29/55 (53%)
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 36/162 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 7/25 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 7/38 (18%)
Homeodomain 186..242 CDD:459649 29/55 (53%)

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