Protein Alignment tin and hoxc12

DIOPT Version :10

• Sequence 1: NP_524433.1
• Gene: tin / 42536
• FlyBaseID: FBgn0004110
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 225
• Identity: 67/225 - (29%)
• Similarity: 98/225 - (43%)
• Gaps: 43/225 - (19%)

  Fly   143 HGHPHQSFQHSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPT 207
            :|:| |.:..|..:.|.|.|:  |...|...:|...|.          .|..|....:|.|.:..
 Frog    62 NGYP-QPYLSSPVSINPSFSR--ACDLARVEETKCYYR----------EGCNPDTPSLKRENVLL 113

  Fly   208 P-----YVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKD 267
            |     :...:.|........|||:..       :|.|.:.:|:.|.||.|      :||.|
 Frog   114 PLESGIHSAMNSTFQKYDYTAVDSVPH-------DPPSCQSLESDSGSSLL------NEGTK--- 162

  Fly   268 NSQVTSSRSELRKNSISGNSNPGSNSG----STKPRMKRKPRVLFSQAQVLELECRFRLKKYLTG 328
              ...|..:.:...|..|||.|.|.:.    .|:.|.||||   :|:.|:.|||..|.:.:::|.
 Frog   163 --NAVSEAATMASPSNPGNSLPASGAPWYPIHTRSRKKRKP---YSKIQLAELEGEFMVNEFITR 222

  Fly   329 AEREIIAQKLNLSATQVKIWFQNRRYKSKR 358
            ..|..::.:|:||..||||||||||.|.||
 Frog   223 QRRRELSDRLSLSDQQVKIWFQNRRMKKKR 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tin	NP_524433.1	Homeodomain	302..358	CDD:459649	25/55 (45%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	27/58 (47%)