DRSC/TRiP Functional Genomics Resources

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Protein Alignment tin and barx2

DIOPT Version :10

Sequence 1:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:220 Identity:58/220 - (26%)
Similarity:94/220 - (42%) Gaps:56/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PTPYVTPSPTLDLNSSAEVDS---LQAPTQKL--CVNPLSQRLMETASNSSSLRSIYGSDEGAKK 265
            |:..|.|.|......|..:.|   |...|.:.  .|:||||.......:|.:..||      :.:
Zfish    48 PSLIVRPKPLHSCTGSVPLRSYPLLSVITHQASSSVSPLSQSSPHLPPSSETPLSI------SSE 106

  Fly   266 KDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMK--RKPRVLFSQAQVLELECRFRLKKYLTG 328
            .|....|                         ||:|  |:.|.:|::.|:|.||.:|:.:|||:.
Zfish   107 SDTEHCT-------------------------PRLKKPRRSRTIFTELQLLGLEKKFQKQKYLST 146

  Fly   329 AEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPP--PIPNHV 391
            .:|..:||.|.|:..|||.|:||||.|.|:           :.||... ::||. |.  |..|.:
Zfish   147 PDRLDLAQSLGLTQLQVKTWYQNRRMKWKK-----------MVLKGGH-EAPTK-PKGRPKKNSI 198

  Fly   392 MWPPTMQQSQQQQQHHAQQQQMQHM 416
               ||.::.:.|::..|:..:.:.:
Zfish   199 ---PTTEEIEAQERMEAKLAEEERL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tinNP_524433.1 Homeodomain 302..358 CDD:459649 25/55 (45%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 25/55 (45%)

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