DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Kiss1r

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_076482.2 Gene:Kiss1r / 78976 RGDID:70930 Length:396 Species:Rattus norvegicus


Alignment Length:362 Identity:105/362 - (29%)
Similarity:165/362 - (45%) Gaps:75/362 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 YIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWL 279
            :..:.|:||:|||.||.|:.|...|:||||::|.|||..|:..::.|:|.|.:......|:||..
  Rat    49 FAALMLLGLVGNSLVIFVICRHKHMQTVTNFYIANLAATDVTFLLCCVPFTALLYPLPTWVLGDF 113

  Fly   280 MCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRRARIMI---IGIWVIALVTTIPWL 341
            |||||.|||.|||.|:..:|.|:|:||:....:||:.:.:|..|:.:   :.|||.:...:.|.|
  Rat   114 MCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALTVSLSIWVGSAAVSAPVL 178

  Fly   342 LFFDLVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIW 406
            ....|.|.              |...|.|.:|....... |.|.||:|.||||:.....||..:.
  Rat   179 ALHRLSPG--------------PHTYCSEAFPSRALERA-FALYNLLALYLLPLLATCACYGAML 228

  Fly   407 IKVSTRSI-PGESKDA-QMDRMQQKS---KVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDIS 466
            ..:...:: |..:..| |...:.|::   :.||.:::.|||:||...|.|:.:            
  Rat   229 RHLGRAAVRPAPTDGALQGQLLAQRAGAVRTKVSRLVAAVVLLFAACWGPIQL------------ 281

  Fly   467 QEEFEILKKVMPVAQW----------------LGSSNSCINPILYS-VNKKYRRGFAAIIKSRSC 514
               |.:|:.:.|...|                :..|||.:||:||: :...:|:.|.     |.|
  Rat   282 ---FLVLQALGPSGAWHPRSYAAYALKIWAHCMSYSNSALNPLLYAFLGSHFRQAFC-----RVC 338

  Fly   515 -CGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSS 550
             ||..|              ::..|...:|.|.:|.|
  Rat   339 PCGPQR--------------QRRPHASAHSDRAAPHS 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 94/314 (30%)
TM helix 1 210..236 CDD:320124 9/20 (45%)
TM helix 2 243..269 CDD:320124 10/25 (40%)
TM helix 3 281..311 CDD:320124 16/29 (55%)
TM helix 4 322..340 CDD:320124 4/20 (20%)
TM helix 5 379..404 CDD:320124 11/24 (46%)
TM helix 6 429..459 CDD:320124 9/32 (28%)
TM helix 7 474..498 CDD:320124 9/40 (23%)
Kiss1rNP_076482.2 7tmA_KiSS1R 43..334 CDD:320223 94/314 (30%)
TM helix 1 44..70 CDD:320223 9/20 (45%)
TM helix 2 77..103 CDD:320223 10/25 (40%)
TM helix 3 115..145 CDD:320223 16/29 (55%)
TM helix 4 157..177 CDD:320223 4/19 (21%)
TM helix 5 201..230 CDD:320223 11/29 (38%)
TM helix 6 256..286 CDD:320223 10/44 (23%)
TM helix 7 302..327 CDD:320223 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..396 5/16 (31%)

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