DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and oprm1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_571782.2 Gene:oprm1 / 65088 ZFINID:ZDB-GENE-010125-1 Length:382 Species:Danio rerio


Alignment Length:441 Identity:103/441 - (23%)
Similarity:206/441 - (46%) Gaps:94/441 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GSLAGKSLAIAD---ATSSTYYSNLLNLSPATTSLISAAAATKSYNDSAL-RWEQLDGSVDFGFD 198
            |:::....|:::   :.||.:..|..|    ::.|:       :.|.|.. |..:||.|      
Zfish     6 GNISDLLYALSNPMVSNSSIFCRNFSN----SSGLV-------NMNSSVCDRTPELDKS------ 53

  Fly   199 PLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLP 263
               ...:.::::....|.:|.::||:||..|:.|::|..:|:|.||.:|.|||:||.|. ...||
Zfish    54 ---STPVIVAIIITALYSIVCVMGLVGNVLVMYVIIRYTKMKTATNIYIFNLALADSLA-TSTLP 114

  Fly   264 ATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQM---TKRRARIM 325
            ...:..:...|..|..:||.|..|...::..|:::|..:|:||:||:..|:|.:   |.|.|:|:
Zfish   115 FQSVNYLMGTWPFGDELCKIVMSIDYYNMFTSIFTLTTMSVDRYIAVCHPVKALDFRTPRNAKIV 179

  Fly   326 IIGIWVIALVTTIPWLLFFDLVPAEEVFSDALVSAYSQPQFLCQEVWP-PGTDGNLYFLLANLVA 389
            .:..|:::....:|.::...  ...::.|:.::.        |..::| |.........:...:.
Zfish   180 NVCNWILSSAIGLPVMVMAS--TTSDLHSNGIID--------CTLLFPHPSWYWENLLKICVFIF 234

  Fly   390 CYLLPMSLITLCYVLIWIKV-STRSIPG-ESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPL 452
            .:::|:.:||:||.|:.::: |.|.:.| :.||..:.|        :.:|::.||.:|::.|.|:
Zfish   235 AFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRR--------ITRMVLVVVAVFIVCWTPI 291

  Fly   453 YVIFARIKFGSDISQEEFEILKKVMPVAQ-------W-----LGSSNSCINPILYS-VNKKYRRG 504
            ::               |.|:|.::.:..       |     ||.:|||:||:||: :::.::|.
Zfish   292 HI---------------FVIIKALVTIPNSLLQTITWHFCIALGYTNSCLNPVLYAFLDENFKRC 341

  Fly   505 FAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAV 555
            |      |..|          :.|.:....::|...:|..|...|| |:.|
Zfish   342 F------REFC----------VPSPSVLDLQNSTRSRNPQRDGQSS-GHTV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 79/314 (25%)
TM helix 1 210..236 CDD:320124 8/25 (32%)
TM helix 2 243..269 CDD:320124 11/25 (44%)
TM helix 3 281..311 CDD:320124 11/29 (38%)
TM helix 4 322..340 CDD:320124 3/17 (18%)
TM helix 5 379..404 CDD:320124 5/24 (21%)
TM helix 6 429..459 CDD:320124 6/29 (21%)
TM helix 7 474..498 CDD:320124 11/36 (31%)
oprm1NP_571782.2 7tmA_Mu_opioid_R 61..342 CDD:320218 79/314 (25%)
TM helix 1 62..88 CDD:320218 8/25 (32%)
TM helix 2 95..121 CDD:320218 11/26 (42%)
TM helix 3 132..162 CDD:320218 11/29 (38%)
TM helix 4 174..196 CDD:320218 5/21 (24%)
TM helix 5 224..253 CDD:320218 6/28 (21%)
TM helix 6 268..298 CDD:320218 9/52 (17%)
TM helix 7 310..335 CDD:320218 10/24 (42%)

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