DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Npffr1

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_006256547.1 Gene:Npffr1 / 64107 RGDID:621570 Length:468 Species:Rattus norvegicus


Alignment Length:375 Identity:126/375 - (33%)
Similarity:210/375 - (56%) Gaps:31/375 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LLNLSPATTSLISAAAATKSYNDSALRW------EQLDGSV--DFGFDPLYRHSLAMSMVYCVAY 215
            ||.:.|.:.:..:.|..::..|.|   |      ..::.|:  ...|...|:||..::.::..||
  Rat    25 LLCIGPDSCAPFAPAEPSQPPNGS---WPLGQNGSDVETSIATSLTFSSYYQHSSPVAAMFIAAY 86

  Fly   216 IVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLM 280
            :::||:.::||:.|..:||:...||||||.||:|||::|:||.:||:|.||:.|:...|......
  Rat    87 VLIFLLCMVGNTLVCFIVLKNRHMRTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNAT 151

  Fly   281 CKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQ-MTKRRARIMIIGIWVIALVTTIPWLLFF 344
            ||....:||:||:|||::|:|::::||..|..|.:: :|.|:|...|..||.:||:...|..:..
  Rat   152 CKMSGLVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALFTIAVIWALALLIMCPSAVTL 216

  Fly   345 DLVPAEEVFS-DALVSAYSQPQFLCQEVWPPGTDGNLY--FLLANLVACYLLPMSLITLCYVLIW 406
            .:...|..|. ||...:|  |.:.|.|.||......:|  .|.|::   ||:|::||.:.||.|.
  Rat   217 TVTREEHHFMLDARNRSY--PLYSCWEAWPEKGMRKVYTAVLFAHI---YLVPLALIVVMYVRIA 276

  Fly   407 IKVSTRSIPGESKD-----AQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDIS 466
            .|:.  ..||.::|     |:..|..:: :.:|:.|||.|.:.|.||||||:|:...|.:| ::|
  Rat   277 RKLC--QAPGPARDTEEAVAEGGRTSRR-RARVVHMLVMVALFFTLSWLPLWVLLLLIDYG-ELS 337

  Fly   467 QEEFEILK-KVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSC 514
            :.:..:|. ...|:|.||...:|..|||:|. .|:.:||||.|..:::.|
  Rat   338 ELQLHLLSVYAFPLAHWLAFFHSSANPIIYGYFNENFRRGFQAAFRAQLC 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 84/235 (36%)
7tm_1 225..495 CDD:278431 102/279 (37%)
Npffr1XP_006256547.1 7tm_4 90..>209 CDD:304433 51/118 (43%)
7tm_1 96..367 CDD:278431 102/279 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354582
Domainoid 1 1.000 178 1.000 Domainoid score I3468
eggNOG 1 0.900 - - E33208_3BBX5
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9048
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24241
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X258
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.840

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