DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and cckar

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_697493.2 Gene:cckar / 569038 ZFINID:ZDB-GENE-120404-2 Length:446 Species:Danio rerio


Alignment Length:382 Identity:112/382 - (29%)
Similarity:190/382 - (49%) Gaps:78/382 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 VYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPW 274
            |..|.|.::|::..:|||.:|||:||..|||||||.|:::||::|:::.|||:|.|||.|:...:
Zfish    49 VRIVLYALIFILSFLGNSLIIAVLLRNRRMRTVTNLFLLSLAVSDLMLCVFCMPFTLIPNLMKDF 113

  Fly   275 MLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQ---MTKRRARIMIIGIWVIALVT 336
            :.|..|||...|..|:||:.|..:|:|:||:|:.||..|||.   .||..|..:|...||::.:.
Zfish   114 IFGSGMCKVATYFMGISVSVSTLNLVAISLERYSAICNPLKSRAWQTKSHAVKVISATWVVSFLL 178

  Fly   337 TIPWLLFFDLVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLC 401
            .:|:.:...|||        .:.:.:....:|:.|||.......|..|  |:..:|:|..::...
Zfish   179 MLPYPIGSTLVP--------FIRSNNSTGNMCRLVWPSDVMQTWYIFL--LLTLFLVPGIIMMTA 233

  Fly   402 YVLIWIKV-------------------STRSIP-GESKDAQMDRMQQK----------------- 429
            |.|..:::                   .|.|:. |:|........::|                 
Zfish   234 YGLTSLELYRGIRFEMTNRKSNREKEYGTSSLKNGDSDGCYFQPSKKKRSEPVMPSHPKSKLRRV 298

  Fly   430 ----------SKVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILKKVMPVA--QW 482
                      :|.:||:||:.:|.||.|.|.|::|:.|...|    .:...:.|....|::  ..
Zfish   299 CSNSPTANLMAKKRVIRMLLVIVGLFFLCWTPVFVVNAWRAF----DRRSADSLLSGAPISFIHL 359

  Fly   483 LGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCC-GRLRYYDNVAIASSTTSTRKSS 537
            |..:::|:|||:|. :||::|:|   |:.:.||| |.:..:       |.:|||:|:
Zfish   360 LSYTSACVNPIVYCFMNKRFRQG---ILSTFSCCRGDVDEF-------SRSSTRRSA 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 78/276 (28%)
7tm_1 225..495 CDD:278431 93/321 (29%)
cckarXP_697493.2 7tm_4 54..>195 CDD:304433 58/148 (39%)
7tm_1 64..372 CDD:278431 93/321 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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