DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npffr1l3

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001082858.1 Gene:npffr1l3 / 561324 ZFINID:ZDB-GENE-070424-44 Length:412 Species:Danio rerio


Alignment Length:329 Identity:121/329 - (36%)
Similarity:198/329 - (60%) Gaps:20/329 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 PLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLP 263
            |.|:|||..:.::.:||:.:||:.|:||:.|..:|||...||||||.||:|||::|:||.:||:|
Zfish     8 PYYQHSLPTAALFSLAYLFIFLLCLMGNALVCVIVLRNRHMRTVTNIFILNLAVSDLLVGIFCIP 72

  Fly   264 ATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLK-QMTKRRARIMII 327
            .||:.|:...|.....:||....:||:||:|||::|:|:::|||..|.:|.| ::|...|::.|.
Zfish    73 TTLVDNLITGWPFSNTVCKLSGLVQGMSVSASVFTLVAIAVDRFRCIVYPFKPKLTLFIAKVSIG 137

  Fly   328 GIWVIALVTTIPWLLFFDLVPAEE-----VFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANL 387
            .||::||....|.:|.  |...:|     :::|...:.|  |.:.|.|.||......:|..:. .
Zfish   138 TIWLLALTIMFPSVLM--LTVEQERAHFMIYNDDQNNTY--PLYSCYETWPDPEMRKIYTTVL-F 197

  Fly   388 VACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPL 452
            :..|::|::||.|.|..|..|:.:.:: .|..:|     |.|.|::|:|||:.|.:||:||||||
Zfish   198 LHIYVIPLALIMLMYGRIGAKLYSAAV-SEHANA-----QGKRKIRVVKMLIMVALLFMLSWLPL 256

  Fly   453 YVIFARIKFGSDISQEEFEILKK-VMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCC 515
            :.:.....:|.. ..:..|||.. :.|::.||..|||.:|||:|. .|:.::|||.|:.:.::|.
Zfish   257 WTLMMLTDYGHP-DNDSLEILTSYIFPLSHWLAFSNSSVNPIIYGYFNENFKRGFQAVFQRQACF 320

  Fly   516 GRLR 519
            .|.|
Zfish   321 RRRR 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 84/232 (36%)
7tm_1 225..495 CDD:278431 102/276 (37%)
npffr1l3NP_001082858.1 7tm_4 28..>148 CDD:304433 54/119 (45%)
7tm_1 34..299 CDD:278431 102/276 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596910
Domainoid 1 1.000 184 1.000 Domainoid score I3340
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24292
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24241
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X258
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.940

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