DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and sstr2b

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_017210358.2 Gene:sstr2b / 560530 ZFINID:ZDB-GENE-130530-727 Length:373 Species:Danio rerio


Alignment Length:377 Identity:115/377 - (30%)
Similarity:180/377 - (47%) Gaps:67/377 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SLAGKSLAIADATSSTYYSNLLNLSPATTSLISAAAATKSYNDSALRWEQLDGSVDFGFDPLYRH 203
            :|:|.||          |..|||:|...|.                           ..:|....
Zfish    16 NLSGYSL----------YDGLLNISEEETQ---------------------------SNEPEQHL 43

  Fly   204 SLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIG 268
            :...:.|..|.|.:|.:|||.||:.||.|:||..:|:||||.:|:|||:|||| .:..||...|.
Zfish    44 TNTNTAVVTVMYFLVCVVGLCGNALVIYVILRYAKMKTVTNIYILNLAVADIL-FMLSLPFIAIQ 107

  Fly   269 NIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRR---ARIMIIGIW 330
            ...|.|..|..||..|..|..::...|::.|:.:|:||::|:..|:|.:..|:   |:...:.:|
Zfish   108 LAMVHWPFGATMCHVVITIDSLNQFTSIFCLMVMSIDRYLAVVHPMKSIKWRKPQVAKATNVAVW 172

  Fly   331 VIALVTTIPWLLFFDLV-PAEEVFSDALVSAYSQPQFLCQEVWP-PGTDGNLYFLLANLVACYLL 393
            |::|:..:|.:.:..|: .||..|              |..||| |.......|::...:..:.|
Zfish   173 VVSLLVILPVVFYSGLITKAEGCF--------------CSIVWPDPQGAYQTAFMIYTFLLGFFL 223

  Fly   394 PMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFAR 458
            |:.:|.|||:||.|||.:..|...|.      .::.|:.||.:::..||::||..|||.| ||..
Zfish   224 PLMVICLCYLLIIIKVKSSGIKVSSS------KRRYSEKKVTRLVSVVVLVFVFCWLPFY-IFNM 281

  Fly   459 IKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAII 509
            ......||...|  |:.|......||.:|||.|||||: :::.:|:.|..::
Zfish   282 TSVTGTISDTPF--LRSVFAFVVVLGYANSCANPILYAFLSENFRKSFQNVL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 103/301 (34%)
TM helix 1 210..236 CDD:320124 13/25 (52%)
TM helix 2 243..269 CDD:320124 13/25 (52%)
TM helix 3 281..311 CDD:320124 9/29 (31%)
TM helix 4 322..340 CDD:320124 4/17 (24%)
TM helix 5 379..404 CDD:320124 7/24 (29%)
TM helix 6 429..459 CDD:320124 13/29 (45%)
TM helix 7 474..498 CDD:320124 11/24 (46%)
sstr2bXP_017210358.2 None

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