DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npffr1l1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001165167.1 Gene:npffr1l1 / 559950 ZFINID:ZDB-GENE-091118-18 Length:398 Species:Danio rerio


Alignment Length:416 Identity:130/416 - (31%)
Similarity:215/416 - (51%) Gaps:49/416 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 TKSYNDSA--LRWEQLDGSVDFGFDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPR 238
            |.:.|.||  |.|:...      ..|.|.||..|::.|.::|::|.|:.::||..|..||:|...
Zfish     3 TMTLNHSAANLSWQNCT------LLPYYIHSAGMAVSYILSYLLVLLLCVVGNGLVCLVVIRNRN 61

  Fly   239 MRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVS 303
            ||:|||.||:|||::|:||.:||:|.|||.::...|....:.|.....:||:||:|||::|:|::
Zfish    62 MRSVTNLFILNLAVSDLLVGIFCVPTTLIDSLISGWPFSQITCTMSNLVQGMSVSASVFTLVAIA 126

  Fly   304 LDRFIAIWWP----LKQMTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAEEVFSDALVSAYSQP 364
            :|||..|.:|    |:.:|   |...|:.||::|.....|......::..::::.......|  |
Zfish   127 VDRFTGIVYPFHHRLRPVT---ALFAIVFIWLLAFAIIFPSAATLTVIHLDDMYMVQNDQIY--P 186

  Fly   365 QFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQK 429
            .|:|.|.||......:|..:. .|..||.|:.||::.|..|..|:|:        :.|.:|::.:
Zfish   187 LFVCFEDWPRADMRRVYTTVI-FVHVYLAPLGLISIMYGCIAAKLSS--------NLQENRLRSR 242

  Fly   430 SKVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILKK-VMPVAQWLGSSNSCINPI 493
            .::||||||:.|.:||::|||||:.:.....: .|:.:::.:.|.. :.|||.||...||.:|||
Zfish   243 RRMKVIKMLIMVAVLFMVSWLPLWTLMLLTDY-QDLDRQQIDFLSSYLFPVAHWLAFFNSGVNPI 306

  Fly   494 LYS-VNKKYRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHY-------HQNSSRKSPSS 550
            :|. .|:.:||||.|.:    .||         ..||..|..:.:|:       ..:.||...|.
Zfish   307 IYGFFNENFRRGFQAAV----ACG---------FCSSVASEMRHTHFVLPPPNKVSDGSRGVTSG 358

  Fly   551 KGNAVSYIYEHNSLRRHNMMLKQDSN 576
            :......:..|.:......:|.:|.|
Zfish   359 RKERCFPVIPHGAAHGIQGILLEDMN 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 103/301 (34%)
TM helix 1 210..236 CDD:320124 9/25 (36%)
TM helix 2 243..269 CDD:320124 16/25 (64%)
TM helix 3 281..311 CDD:320124 13/29 (45%)
TM helix 4 322..340 CDD:320124 5/17 (29%)
TM helix 5 379..404 CDD:320124 8/24 (33%)
TM helix 6 429..459 CDD:320124 14/29 (48%)
TM helix 7 474..498 CDD:320124 11/25 (44%)
npffr1l1NP_001165167.1 7tm_GPCRs 32..319 CDD:475119 103/301 (34%)
TM helix 1 34..58 CDD:320647 9/23 (39%)
TM helix 2 67..89 CDD:320647 12/21 (57%)
TM helix 3 105..127 CDD:320647 9/21 (43%)
TM helix 4 148..164 CDD:320647 4/15 (27%)
TM helix 5 201..224 CDD:320647 7/23 (30%)
TM helix 6 248..270 CDD:320647 12/21 (57%)
TM helix 7 287..312 CDD:320647 11/24 (46%)

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