DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and tacr3l

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001243564.1 Gene:tacr3l / 559201 ZFINID:ZDB-GENE-061207-19 Length:395 Species:Danio rerio


Alignment Length:394 Identity:114/394 - (28%)
Similarity:201/394 - (51%) Gaps:47/394 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 VYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFV-- 272
            |:.|||..|..|.:.||..||.::|...|||||||||::|||.:|..:..|   .|||..|:.  
Zfish    27 VWSVAYSSVLAVAVFGNLIVIWIILAHKRMRTVTNYFLLNLAFSDASMAAF---NTLINFIYATH 88

  Fly   273 -PWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLK-QMTKRRARIMIIGIWVIALV 335
             .|..|.:.|||..:....:|.||:||:.|:::||::||..||| :::....:::|:.||.:|::
Zfish    89 GEWYFGEVYCKFHNFFPVTAVFASIYSMTAIAVDRYMAIIHPLKPRLSATATKVVIVCIWALAVI 153

  Fly   336 TTIPWLLFFDLVPAEEVFSDALVSAYSQP-QFLCQEVWP-PGTDGNLYFLLANLVACYLLPMSLI 398
            ...| |.|:.             :..:.| :.:|...|| |..|..:|.::.. |..|:||:.::
Zfish   154 LAFP-LCFYS-------------TTRTMPRRTICYVAWPRPAEDSFMYHIIVT-VLVYMLPLVVM 203

  Fly   399 TLCYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARIKFGS 463
            .:.|.::.:.:....|||:|.|..:.  |.::|.||:||::.||:.|.|.|||.::.|  |..|.
Zfish   204 GITYTIVGVTLWGGEIPGDSSDNYVG--QLRAKRKVVKMMIVVVVTFALCWLPYHIYF--IVTGL 264

  Fly   464 DISQEEFEILKKVMPVAQWLGSSNSCINPILY-SVNKKYRRGFAAIIKSRSCCG--RLRYYDNVA 525
            :....:::.:::|.....||..|::..|||:| .:|.::|.||....:   .|.  ::..||.:.
Zfish   265 NKRLNKWKSIQQVYLSVLWLAMSSTMYNPIIYCCLNGRFRAGFKRAFR---WCPFIQVSSYDELE 326

  Fly   526 I----------ASSTTSTRKSSHYHQNSSRKS--PSSKGNAVSYIYEHNSLRRHNMMLKQDSNLS 578
            :          :|..|.:|..:..|....|:|  .|:|...:..:.:.|: ....:.|.:|...:
Zfish   327 LRPTRLHPRNQSSMCTLSRVDTSLHGEDPRRSQRKSTKSQCLVEVRDENT-PATKLCLNRDQAFA 390

  Fly   579 QQML 582
            .:.|
Zfish   391 TEQL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 97/301 (32%)
TM helix 1 210..236 CDD:320124 11/25 (44%)
TM helix 2 243..269 CDD:320124 12/25 (48%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 4/17 (24%)
TM helix 5 379..404 CDD:320124 6/24 (25%)
TM helix 6 429..459 CDD:320124 13/29 (45%)
TM helix 7 474..498 CDD:320124 8/24 (33%)
tacr3lNP_001243564.1 7tm_GPCRs 26..307 CDD:475119 97/301 (32%)
TM helix 1 28..52 CDD:320669 9/23 (39%)
TM helix 2 61..83 CDD:320669 11/24 (46%)
TM helix 3 99..121 CDD:320669 8/21 (38%)
TM helix 4 142..158 CDD:320669 5/16 (31%)
TM helix 5 185..208 CDD:320669 5/23 (22%)
TM helix 6 238..260 CDD:320669 10/23 (43%)
TM helix 7 275..300 CDD:320669 8/24 (33%)

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