DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Galr1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_037090.2 Gene:Galr1 / 50577 RGDID:2656 Length:346 Species:Rattus norvegicus


Alignment Length:321 Identity:94/321 - (29%)
Similarity:159/321 - (49%) Gaps:45/321 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SMVYCVAYIVVFLVGLIGNSFVIAVVLRAP--RMRTVTNYFIVNLAIADILVIVFCLPATLIGNI 270
            :.:..|.:.::|.:|::|||.||.|:.|:.  :.|:.||.||:||:|||:..::||:|.......
  Rat    32 NFITLVVFGLIFAMGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYA 96

  Fly   271 FVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRRARIMIIG---IWVI 332
            ...|:||..:|||:.|...||:..|:::|.|:|:||::||....:..:.|.:|..::|   ||.:
  Rat    97 LPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGFIWAL 161

  Fly   333 ALVTTIPWLLFFDLVPAEEVFSDALVSAYSQPQF-------LCQEVWPPGTDGNLYFLLANLVAC 390
            ::....|                   .||.|..|       .|.|.||.......| ::...|..
  Rat   162 SIAMASP-------------------VAYYQRLFHRDSNQTFCWEHWPNQLHKKAY-VVCTFVFG 206

  Fly   391 YLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVI 455
            ||||:.||..||..:...:       ..|...|.:..:.||.|..:.::.||::|.:||||.:||
  Rat   207 YLLPLLLICFCYAKVLNHL-------HKKLKNMSKKSEASKKKTAQTVLVVVVVFGISWLPHHVI 264

  Fly   456 FARIKFGS-DISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSC 514
            ....:||: .::...|..    ...|..|..|||.:|||:|: :::.:|:.:..:.|.|.|
  Rat   265 HLWAEFGAFPLTPASFFF----RITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCRVC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 91/309 (29%)
TM helix 1 210..236 CDD:320124 9/25 (36%)
TM helix 2 243..269 CDD:320124 12/25 (48%)
TM helix 3 281..311 CDD:320124 13/29 (45%)
TM helix 4 322..340 CDD:320124 4/20 (20%)
TM helix 5 379..404 CDD:320124 10/24 (42%)
TM helix 6 429..459 CDD:320124 12/29 (41%)
TM helix 7 474..498 CDD:320124 9/24 (38%)
Galr1NP_037090.2 7tmA_Gal1_R 33..312 CDD:320226 91/309 (29%)
TM helix 1 34..60 CDD:320226 9/25 (36%)
TM helix 2 69..95 CDD:320226 12/25 (48%)
TM helix 3 107..137 CDD:320226 13/29 (45%)
TM helix 4 149..169 CDD:320226 5/38 (13%)
TM helix 5 195..224 CDD:320226 10/29 (34%)
TM helix 6 238..268 CDD:320226 12/29 (41%)
TM helix 7 280..305 CDD:320226 10/28 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..346
Blue background indicates that the domain is not in the aligned region.

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