DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and AstC-R1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:237 Identity:45/237 - (18%)
Similarity:81/237 - (34%) Gaps:80/237 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RMIQKIDAQLRAYILHLHNEVRDRLARGDEAGFAAASRMPTVTWDDELANLAEINVRSCRFEHDE 121
            |.|:|.:.:.....|:....:..|:|   |.|..:...:..||::.|     |:.::|       
  Fly    30 RDIEKKNTKSGGVRLNSRRLIHGRVA---EKGTKSLPSLTQVTFEGE-----ELKLKS------- 79

  Fly   122 CRSTYQYLHAGQNLAVGSYYLET-----DIFEIIHNLTGLWHREYLDTTQEVLDKYT-TDYNATI 180
                            ||:|.::     |.|            :|:..::..   || .|.|..|
  Fly    80 ----------------GSHYFKSLDDAIDFF------------DYMVRSRPF---YTAVDCNKVI 113

  Fly   181 GHYTQMVSDRTTAIGCGVVIYPKKMEDFVFKMVLYACNYAITSI--VHQPIYRKGEPASRCRTGT 243
            |.:.:|  :|...   .:.:| :|||.....:.:|:.|..|...  .|:..:.........:.|.
  Fly   114 GVFVRM--NRPDV---AISLY-RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172

  Fly   244 NPDYA-------GLCSWE-------------ENQFIKAVPAY 265
            .||..       |||..:             |..|::||..:
  Fly   173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 14/79 (18%)
TM helix 1 210..236 CDD:320124 4/27 (15%)
TM helix 2 243..269 CDD:320124 9/43 (21%)
TM helix 3 281..311 CDD:320124
TM helix 4 322..340 CDD:320124
TM helix 5 379..404 CDD:320124
TM helix 6 429..459 CDD:320124
TM helix 7 474..498 CDD:320124
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 33/181 (18%)
TM helix 1 79..105 CDD:320222 7/63 (11%)
TM helix 2 112..138 CDD:320222 8/31 (26%)
TM helix 3 149..179 CDD:320222 4/29 (14%)
TM helix 4 191..213 CDD:320222 4/21 (19%)
TM helix 5 241..270 CDD:320222
TM helix 6 287..317 CDD:320222
TM helix 7 332..357 CDD:320222
Blue background indicates that the domain is not in the aligned region.

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